Single-Molecule Diffusion and Conformational Dynamics by Spatial Integration of Temporal Fluctuations
byMaged F. Serag, Maram Abadi, Satoshi Habuchi
Nat. Commun.Year:2014ISSN:DOI: 10.1038/ncomms6123
Bibliography
Single-Molecule Diffusion and Conformational Dynamics by Spatial Integration of Temporal Fluctuations
Maged F. Serag, Maram Abadi, Satoshi Habuchi
Nature Communications 2014, 5, 5123.
Abstract
Single-molecule localization and tracking has been used to translate
spatiotemporal information of individual molecules to map their
diffusion behaviours. However, accurate analysis of diffusion behaviours
and including other parameters, such as the conformation and size of
molecules, remain as limitations to the method. Here, we report a method
that addresses the limitations of existing single-molecular
localization methods. The method is based on temporal tracking of the
cumulative area occupied by molecules. These temporal fluctuations are
tied to molecular size, rates of diffusion and conformational changes.
By analysing fluorescent nanospheres and double-stranded DNA molecules
of different lengths and topological forms, we demonstrate that our
cumulative-area method surpasses the conventional single-molecule
localization method in terms of the accuracy of determined diffusion
coefficients. Furthermore, the cumulative-area method provides
conformational relaxation times of structurally flexible chains along
with diffusion coefficients, which together are relevant to work in a
wide spectrum of scientific fields.